PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_016647633.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 235aa    MW: 27426.4 Da    PI: 9.5312
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_016647633.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH22.22.5e-0782128455
                     HHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   4 ahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 
                     +h  +Er RR++ ++++  L ++lP+ a      K +K  i++++   I++Lq
  XP_016647633.1  82 SHMLNERMRREKQKQGYMALHSMLPTgA------KSDKNWIVQMTAMNIQQLQ 128
                     58889*********************66......899999*****99999998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474593.79E-1077142IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088810.54478127IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000107.8E-582128IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.105.8E-782142IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009414Biological Processresponse to water deprivation
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 235 aa     Download sequence    Send to blast
MNMDQYILEA LEGEFLLYES LPVLNQRAFV PYTSRPITEK GLDKPPNSMN MNKRMVQFLR  60
KIWAPATARI VTGEDCRERG FSHMLNERMR REKQKQGYMA LHSMLPTGAK SDKNWIVQMT  120
AMNIQQLQRY KEELRKRNME VEAILVANEK ERVNWSKIRL RVANPTSGVD SMLEVLRCLQ  180
YLGLKARNVQ SNFSAQEFSA ELEIETKVSX AEIEEALQET LYEAERKLRF SIPGR
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007227265.11e-167hypothetical protein PRUPE_ppa017791mg
TrEMBLM5XRD41e-167M5XRD4_PRUPE; Uncharacterized protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G43650.12e-42bHLH family protein